[LON-CAPA-users] YUM problem with tre-common on CentOS 7
D G Teed
donald.teed at gmail.com
Tue Aug 20 08:22:12 EDT 2019
Hello,
I've just migrated our Redhat 6 Lon-Capa to CentOS 7.
It seems the site is working OK. When I did a yum update recently there is
a conflict with tre-common being provided by both epel and loncapa-updates
I tried exclude=tre-common within /etc/yum.repos.d/epel.repo
and did yum clean all followed by yum update. Same error as previously.
This package wasn't part of the R dependencies on the previous OS version
so I can't compare to how it was satisfied on the previous server.
I think the problem is that tre comes from epel and lists a dependency and
version found only
on epel of tre-common, while loncapa-updates provides tre-common but not
the matching tre so
it isn't possible to make epel not provide tre packages.
# yum list tre-common
Loaded plugins: fastestmirror
Loading mirror speeds from cached hostfile
* base: mirror.calgah.com
* epel: epel.mirror.constant.com
* extras: mirror.its.dal.ca
* updates: mirror.calgah.com
Installed Packages
tre-common.noarch 0.8.0-18.20140228gitc2f5d13.el7
@epel
Available Packages
tre-common.noarch
0.8.0-18.20140228gitc2f5d13.el7.centos
loncapa-updates-noarch
# yum list tre
Loaded plugins: fastestmirror
Loading mirror speeds from cached hostfile
* base: mirror.its.dal.ca
* epel: epel.mirror.constant.com
* extras: mirror.its.dal.ca
* updates: mirror.its.dal.ca
Installed Packages
tre.x86_64
0.8.0-18.20140228gitc2f5d13.el7
@epel
# yum update
Loaded plugins: fastestmirror
Loading mirror speeds from cached hostfile
epel/x86_64/metalink
|
14 kB 00:00:00
* base: mirror.calgah.com
* epel: epel.mirror.constant.com
* extras: mirror.its.dal.ca
* updates: mirror.calgah.com
Resolving Dependencies
--> Running transaction check
---> Package tre-common.noarch 0:0.8.0-18.20140228gitc2f5d13.el7 will be
updated
--> Processing Dependency: tre-common = 0.8.0-18.20140228gitc2f5d13.el7 for
package: tre-0.8.0-18.20140228gitc2f5d13.el7.x86_64
---> Package tre-common.noarch 0:0.8.0-18.20140228gitc2f5d13.el7.centos
will be an update
--> Finished Dependency Resolution
Error: Package: tre-0.8.0-18.20140228gitc2f5d13.el7.x86_64 (@epel)
Requires: tre-common = 0.8.0-18.20140228gitc2f5d13.el7
Removing: tre-common-0.8.0-18.20140228gitc2f5d13.el7.noarch
(@epel)
tre-common = 0.8.0-18.20140228gitc2f5d13.el7
Updated By:
tre-common-0.8.0-18.20140228gitc2f5d13.el7.centos.noarch
(loncapa-updates-noarch)
tre-common = 0.8.0-18.20140228gitc2f5d13.el7.centos
You could try using --skip-broken to work around the problem
You could try running: rpm -Va --nofiles --nodigest
[root at sirius ~]# yum clean all
Loaded plugins: fastestmirror
Cleaning repos: base epel extras loncapa-updates-basearch
loncapa-updates-noarch updates
Cleaning up list of fastest mirrors
Other repos take up 115 M of disk space (use --verbose for details)
[root at sirius ~]# yum update
Loaded plugins: fastestmirror
Determining fastest mirrors
epel/x86_64/metalink
|
14 kB 00:00:00
* base: mirror.its.dal.ca
* epel: epel.mirror.constant.com
* extras: mirror.its.dal.ca
* updates: mirror.its.dal.ca
base
|
3.6 kB 00:00:00
epel
|
5.3 kB 00:00:00
extras
|
3.4 kB 00:00:00
loncapa-updates-basearch
|
951 B 00:00:00
loncapa-updates-noarch
|
951 B 00:00:00
updates
|
3.4 kB 00:00:00
(1/7): base/7/x86_64/group_gz
|
166 kB 00:00:00
(2/7): epel/x86_64/group_gz
|
88 kB 00:00:00
(3/7): epel/x86_64/updateinfo
|
999 kB 00:00:00
(4/7): extras/7/x86_64/primary_db
|
215 kB 00:00:00
(5/7): epel/x86_64/primary_db
|
6.8 MB 00:00:00
(6/7): base/7/x86_64/primary_db
|
6.0 MB 00:00:00
(7/7): updates/7/x86_64/primary_db
|
7.4 MB 00:00:00
(1/2): loncapa-updates-noarch/7/primary
| 32 kB
00:00:00
(2/2): loncapa-updates-basearch/7/x86_64/primary
| 31 kB
00:00:00
loncapa-updates-basearch
81/81
loncapa-updates-noarch
65/65
Resolving Dependencies
--> Running transaction check
---> Package tre-common.noarch 0:0.8.0-18.20140228gitc2f5d13.el7 will be
updated
--> Processing Dependency: tre-common = 0.8.0-18.20140228gitc2f5d13.el7 for
package: tre-0.8.0-18.20140228gitc2f5d13.el7.x86_64
---> Package tre-common.noarch 0:0.8.0-18.20140228gitc2f5d13.el7.centos
will be an update
--> Finished Dependency Resolution
Error: Package: tre-0.8.0-18.20140228gitc2f5d13.el7.x86_64 (@epel)
Requires: tre-common = 0.8.0-18.20140228gitc2f5d13.el7
Removing: tre-common-0.8.0-18.20140228gitc2f5d13.el7.noarch
(@epel)
tre-common = 0.8.0-18.20140228gitc2f5d13.el7
Updated By:
tre-common-0.8.0-18.20140228gitc2f5d13.el7.centos.noarch
(loncapa-updates-noarch)
tre-common = 0.8.0-18.20140228gitc2f5d13.el7.centos
You could try using --skip-broken to work around the problem
You could try running: rpm -Va --nofiles --nodigest
What do you suggest I try to resolve that issue? I have not tried the
exclude on the lon-capa repo, but assumed
there was a reason the package exists there.
Regards,
--Donald Teed
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