[LON-CAPA-admin] make build

hkng hkng at fsu.edu
Mon Aug 5 12:55:33 EDT 2013


Thanks,


The installation using the clean cvs update is successful. However, http
restart failed - error_log shows the following message.


[Mon Aug 05 12:47:06 2013] [error] Can't locate Captcha/reCAPTCHA.pm in
@INC (@INC contains: /home/httpd/lib/perl/ /usr/lib/
perl5/site_perl/5.6.0/i386-linux/ /home/httpd/lib/perl
/usr/local/lib64/perl5 /usr/local/share/perl5 /usr/lib64/perl5/vendor
_perl /usr/share/perl5/vendor_perl /usr/lib64/perl5 /usr/share/perl5 .
/etc/httpd) at /home/httpd/lib/perl//Apache/loncommon
.pm line 76.\nBEGIN failed--compilation aborted at
/home/httpd/lib/perl//Apache/loncommon.pm line 76.\nCompilation failed in
 require at /home/httpd/lib/perl//Apache/lonmenu.pm line 197.\nBEGIN
failed--compilation aborted at /home/httpd/lib/perl//Ap
ache/lonmenu.pm line 197.\nCompilation failed in require at
/home/httpd/lib/perl//Apache/londefdef.pm line 47.\nBEGIN failed
--compilation aborted at /home/httpd/lib/perl//Apache/londefdef.pm line
47.\nCompilation failed in require at /home/httpd/li
b/perl//Apache/lonxml.pm line 99.\nBEGIN failed--compilation aborted at
/home/httpd/lib/perl//Apache/lonxml.pm line 99.\nCom
pilation failed in require at /etc/httpd/conf/startup.pl line 40.\nBEGIN
failed--compilation aborted at /etc/httpd/conf/star
tup.pl line 40.\nCompilation failed in require at (eval 2) line 1.\n
[Mon Aug 05 12:47:06 2013] [error] Can't load Perl file:
conf/startup.plfor server
sd.loncapa.fsu.edu:0, exiting...


yum list *Captcha*

Loaded plugins: fastestmirror, refresh-packagekit, security
Loading mirror speeds from cached hostfile
 * base: mirror.net.cen.ct.gov
 * epel: www.gtlib.gatech.edu
 * extras: mirror.teklinks.com
 * updates: mirror.cogentco.com
Installed Packages
perl-Authen-Captcha.noarch
1.023-4.el6                                            @epel
Available Packages
django-recaptcha.noarch
0.1-1.20091212svn6.el6                                 epel
django-recaptcha-works.noarch
0.3.4-1.el6                                            epel
django-simple-captcha.noarch
0.2.0-4.el6                                            epel
php-ZendFramework-Captcha.noarch
1.12.3-1.el6                                           epel
php-pear-Text-CAPTCHA.noarch
0.4.4-1.el6                                            epel
python-recaptcha-client.noarch
1.0.5-3.1.el6                                          epel
python-tgcaptcha.noarch
0.11-7.el6                                             epel
python-tgcaptcha2.noarch
0.2.0-2.el6                                            epel
rubygem-recaptcha.noarch
0.3.1-1.el6                                            epel
rubygem-recaptcha-doc.noarch
0.3.1-1.el6

Is there some other perl module that needs to be installed with the
upcoming version? (The same message appears with 2.11 version.)

-hk





On Mon, Aug 5, 2013 at 12:13 PM, Stuart Raeburn <raeburn at msu.edu> wrote:

> Hi,
>
>
>  Maybe there are some other directories than need to be clean up?
>>
>
> Yes. I would recommend deleting the CAPA directory, and then updating from
> CVS.
>
> cd /home/ng/loncapa
> rm -rf CAPA
> cvs update -A -d CAPA
>
> Then run make build and make install again:
>
> cd loncom/build
>
> make clean
> make build
> su
> make install
>
> You potentially might also run into a similar 32 bit versus 64 bit issue
> with tth.so, which could be solved by:
>
> cd /home/ng/loncapa/modules
> rm -rf TexCovert
> cvs update -A -d TexConvert
>
> In general, I would say that unless you have made uncommitted
> modifications to your local copy of the CVS repository on a 32 bit
> development server which you are migrating to 64 bit architecture, the
> simplest thing is *not* to rsync the local CVS copy from the 32 bit
> hardware to the 64 bit hardware, but simply to do a new CVS checkout on the
> 64 bit instance.
>
> cd /home/ng/
> cvs co loncapa
> cd loncapa
> cvs co modules
>
> That way you will not be attempting to link against any previously
> compiled 32 bit files when you run make build within your local copy of the
> LON-CAPA CVS repository on the 64 bit machine/VM.
>
> In any event removing the appropriate *.o files from /home/ng/loncapa/CAPA
> and /home/ng/loncapa/loncom/**homework/caparesponse (as described in this
> and my previous post) should also resolve this issue.
>
>
>
> Stuart Raeburn
> LON-CAPA Academic Consortium
>
>
> Quoting hkng <hkng at fsu.edu>:
>
>  Hi,
>>
>> I removed the caparesponse directory and repopulate using cvs but did not
>> solve the problem. Still give me the same message. (More detailed messages
>> below.)
>>
>> This line below indicates some module not includes in @INC but I can
>> install 2.10 successfully.
>>
>> Can't locate loadable object for module capa in @INC (@INC contains:
>> /usr/local/lib64/perl5 /usr/local/share/perl5 /usr/lib64/perl5/vendor_perl
>> /usr/share/perl5/vendor_perl /usr/lib64/perl5 /usr/share/perl5 .) at
>> capa.pmline 11
>>
>>
>> The target version (2.11) gives me the same message.
>>
>> Maybe there are some other directories than need to be clean up?
>>
>> Thanks,
>> -hk
>>
>>
>>
>>
>>
>>
>> make[2]: Leaving directory `/home/ng/loncapa/loncom/**
>> homework/caparesponse'
>> mkdir: cannot create directory `capaFunctions': File exists
>> make[2]: Entering directory `/home/ng/loncapa/CAPA/pProj'
>> make[2]: Nothing to be done for `libcapa'.
>> make[2]: Leaving directory `/home/ng/loncapa/CAPA/pProj'
>> capa.i:6: Warning(124): Specifying the language name in %typemap is
>> deprecated - use #ifdef SWIG<LANG> instead.
>> capa.i:20: Warning(124): Specifying the language name in %typemap is
>> deprecated - use #ifdef SWIG<LANG> instead.
>> capa.i:29: Warning(124): Specifying the language name in %typemap is
>> deprecated - use #ifdef SWIG<LANG> instead.
>> capa.i:44: Warning(124): Specifying the language name in %typemap is
>> deprecated - use #ifdef SWIG<LANG> instead.
>> capa.i:18: Warning(450): Deprecated typemap feature ($source/$target).
>> capa.i:18: Warning(450): The use of $source and $target in a typemap
>> declaration is deprecated.
>> For typemaps related to argument input (in,ignore,default,arginit,**
>> check),
>> replace
>> $source by $input and $target by $1.   For typemaps related to return
>> values (out,
>> argout,ret,except), replace $source by $1 and $target by $result.  See the
>> file
>> Doc/Manual/Typemaps.html for complete details.
>> capa.i:27: Warning(450): Deprecated typemap feature ($source/$target).
>> capa.i:42: Warning(450): Deprecated typemap feature ($source/$target).
>> capa.i:49: Warning(450): Deprecated typemap feature ($source/$target).
>> Writing Makefile for capa
>> make[2]: Entering directory `/home/ng/loncapa/loncom/**
>> homework/caparesponse'
>> cp caparesponse.pm blib/lib/caparesponse.pm
>> cp Makefile.pl blib/lib/Makefile.pl
>> cp capa.pm blib/lib/capa.pm
>> gcc -c  -I../../../CAPA/pProj -D_REENTRANT -D_GNU_SOURCE
>> -fno-strict-aliasing -pipe -fstack-protector -I/usr/local/include
>> -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -O2 -g -pipe -Wall
>> -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector
>> --param=ssp-buffer-size=4 -m64 -mtune=generic   -DVERSION=\"\"
>> -DXS_VERSION=\"\" -fPIC "-I/usr/lib64/perl5/CORE"  -g -O0 -D_GNU_SOURCE
>> -DPERL_POLLUTE capa_wrap.c
>> capa_wrap.c: In function 'SWIG_Perl_ConvertPtrAndOwn':
>> capa_wrap.c:1198: warning: value computed is not used
>> capa_wrap.c: In function 'SWIG_Perl_MakePtr':
>> capa_wrap.c:1225: warning: value computed is not used
>> capa_wrap.c: In function '_wrap_caparesponse_capa_**check_answer':
>> capa_wrap.c:1892: warning: passing argument 3 of 'Perl_sv_2pv_flags' from
>> incompatible pointer type
>> /usr/lib64/perl5/CORE/proto.h:**3039: note: expected 'STRLEN *' but
>> argument
>> is of type 'int *'
>> capa_wrap.c:1896: warning: implicit declaration of function
>> 'caparesponse_capa_check_**answer'
>> capa_wrap.c: In function '_wrap_caparesponse_get_real_**response':
>> capa_wrap.c:1985: warning: implicit declaration of function
>> 'caparesponse_get_real_**response'
>> capa_wrap.c: In function 'boot_capa':
>> capa_wrap.c:2290: warning: unused variable 'items'
>> gcc -c  -I../../../CAPA/pProj -D_REENTRANT -D_GNU_SOURCE
>> -fno-strict-aliasing -pipe -fstack-protector -I/usr/local/include
>> -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -O2 -g -pipe -Wall
>> -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector
>> --param=ssp-buffer-size=4 -m64 -mtune=generic   -DVERSION=\"\"
>> -DXS_VERSION=\"\" -fPIC "-I/usr/lib64/perl5/CORE"  -g -O0 -D_GNU_SOURCE
>> -DPERL_POLLUTE caparesponse.c
>> caparesponse.c: In function 'caparesponse_get_real_**response':
>> caparesponse.c:161: warning: implicit declaration of function 'isdigit'
>> caparesponse.c:167: warning: implicit declaration of function
>> 'split_num_unit'
>> caparesponse.c:182: warning: implicit declaration of function
>> 'check_for_unit_fail'
>> caparesponse.c:142: warning: unused variable 'seed2'
>> caparesponse.c:142: warning: unused variable 'seed1'
>> caparesponse.c:138: warning: unused variable 'target'
>> Running Mkbootstrap for capa ()
>> chmod 644 capa.bs
>> rm -f blib/arch/auto/capa/capa.so
>> gcc  -shared -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions
>> -fstack-protector --param=ssp-buffer-size=4 -m64 -mtune=generic
>> capa_wrap.o
>> caparesponse.o capaFunctions/*.o  -o blib/arch/auto/capa/capa.so     \
>>              \
>>
>> capaFunctions/capaCommon.o: could not read symbols: File in wrong format
>> collect2: ld returned 1 exit status
>> make[2]: *** [blib/arch/auto/capa/capa.so] Error 1
>> make[2]: Leaving directory `/home/ng/loncapa/loncom/**
>> homework/caparesponse'
>> cp: cannot stat `blib/arch/auto/capa/capa.so': No such file or directory
>> Can't locate loadable object for module capa in @INC (@INC contains:
>> /usr/local/lib64/perl5 /usr/local/share/perl5 /usr/lib64/perl5/vendor_perl
>> /usr/share/perl5/vendor_perl /usr/lib64/perl5 /usr/share/perl5 .) at
>> capa.pmline 11
>> make[1]: *** [../../loncom/homework/**caparesponse/capa.so] Error 255
>> make[1]: Leaving directory `/home/ng/loncapa/loncom/**build'
>> make: *** [build] Error 2
>>
>>
>>
>> On Fri, Aug 2, 2013 at 4:39 PM, Stuart Raeburn <raeburn at msu.edu> wrote:
>>
>>  Hi,
>>>
>>>
>>>  capaFunctions/capaCommon.o: could not read symbols: File in wrong format
>>>
>>>> collect2: ld returned 1 exit status
>>>> make[2]: *** [blib/arch/auto/capa/capa.so] Error 1
>>>>
>>>>
>>> It seems likely that the directory:
>>> /home/ng/loncapa/loncom/****homework/caparesponse
>>>
>>>
>>> contains some files compiled on 32 bit, which suggest you copied the
>>> content of that directory from a different (32 bit) server.
>>>
>>> The following procedure should fix this issue:
>>>
>>> cd /home/ng/loncapa/loncom/****homework/
>>>
>>>
>>> rm -rf caparesponse
>>>
>>> cvs update -A -d caparesponse
>>>
>>>
>>> *******
>>>
>>> After you have done that, the contents of:
>>>
>>> /home/ng/loncapa/loncom/****homework/caparesponse
>>>
>>>
>>> should be:
>>>
>>> -rw-rw-r-- 1 ng ng   5967 Dec 20  2005 caparesponse.c
>>> -rw-rw-r-- 1 ng ng  53622 Jan 21  2013 caparesponse.pm
>>> -rw-rw-r-- 1 ng ng   1446 Jul  1  2003 commands
>>> drwxrwxr-x 2 ng ng   4096 Aug  2 16:31 CVS
>>> -rw-rw-r-- 1 ng ng   1857 May  4  2002 Makefile.PL
>>> -rw-rw-r-- 1 ng ng    519 Oct 24  2000 README
>>> -rw-rw-r-- 1 ng ng    490 Sep 29  2006 test.pl
>>>
>>>
>>> If you now do:
>>>
>>> cd /home/ng/loncapa/loncom/build
>>>
>>> make clean
>>>
>>> make build
>>>
>>> you should find that capa.so will be built for 64-bit and the contents of
>>>
>>> /home/ng/loncapa/loncom/****homework/caparesponse
>>>
>>>
>>> will now be:
>>>
>>> blib           capa.pm          capa.so      CVS           Makefile.PL
>>> capa.bs        caparesponse.c   capa_wrap.c  Makefile      pm_to_blib
>>> capaFunctions  caparesponse.o   capa_wrap.o  Makefile.old  README
>>> capa.i         caparesponse.pm  commands     Makefile.pl   test.pl
>>>
>>> Now you can proceed to use:
>>>
>>> su
>>> make install
>>>
>>> to install CVS HEAD.  You will need to do:
>>>
>>> cd /home/ng/loncapa/loncom/
>>>
>>> ln -s development_dns_domain.tab dns_domain.tab
>>> ln -s development_domain.tab     domain.tab
>>> ln -s development_dns_hosts.tab  dns_hosts.tab
>>> ln -s development_hosts.tab      hosts.tab
>>>
>>> first, if you have not already set up those symbolic links, before
>>> running:
>>>
>>> make install
>>>
>>>
>>> Alternatively, to install a different (tagged) LON-CAPA version (e.g.
>>> 2.11.0.RC1), do:
>>>
>>> cd /home/ng/loncapa/
>>>
>>> cvs update -r version_2_11_0_RC1 -d doc
>>> cvs update -r version_2_11_0_RC1 -d loncom
>>> cvs update -r version_2_11_0_RC1 -d rat
>>> cvs update -r version_2_11_0_RC1 -d modules/TexConvert
>>> cvs update -r version_2_11_0_RC1 -d CAPA
>>>
>>> cd /home/ng/loncapa/loncom/build
>>>
>>> make clean
>>> make build
>>> su make install
>>>
>>>
>>> Stuart Raeburn
>>> LON-CAPA Academic Consortium
>>>
>>>
>>> Quoting hkng <hkng at fsu.edu>:
>>>
>>>  Hi,
>>>
>>>>
>>>> I finally got a 64-bit development server and I did a cvs update but
>>>> when
>>>> running make build, it crashes somewhere in capaFunctions/capaCommon
>>>>
>>>>
>>>> capaFunctions/capaCommon.o: could not read symbols: File in wrong format
>>>> collect2: ld returned 1 exit status
>>>> make[2]: *** [blib/arch/auto/capa/capa.so] Error 1
>>>> make[2]: Leaving directory `/home/ng/loncapa/loncom/**
>>>>
>>>> homework/caparesponse'
>>>> cp: cannot stat `blib/arch/auto/capa/capa.so': No such file or directory
>>>> Can't locate loadable object for module capa in @INC (@INC contains:
>>>> /usr/local/lib64/perl5 /usr/local/share/perl5
>>>> /usr/lib64/perl5/vendor_perl
>>>> /usr/share/perl5/vendor_perl /usr/lib64/perl5 /usr/share/perl5 .) at
>>>> capa.pmline 11
>>>>
>>>> make[1]: *** [../../loncom/homework/****caparesponse/capa.so] Error 255
>>>> make[1]: Leaving directory `/home/ng/loncapa/loncom/****build'
>>>>
>>>> make: *** [build] Error 2
>>>>
>>>> Any pointer?
>>>>
>>>> Thanks,
>>>> -hk
>>>>
>>>>
>>> ______________________________****_________________
>>> LON-CAPA-admin mailing list
>>> LON-CAPA-admin at mail.lon-capa.****org <LON-CAPA-admin at mail.lon-capa.**org<LON-CAPA-admin at mail.lon-capa.org>
>>> >
>>> http://mail.lon-capa.org/****mailman/listinfo/lon-capa-****admin<http://mail.lon-capa.org/**mailman/listinfo/lon-capa-**admin>
>>> <http://mail.lon-capa.**org/mailman/listinfo/lon-capa-**admin<http://mail.lon-capa.org/mailman/listinfo/lon-capa-admin>
>>> >
>>>
>>>
> ______________________________**_________________
> LON-CAPA-admin mailing list
> LON-CAPA-admin at mail.lon-capa.**org <LON-CAPA-admin at mail.lon-capa.org>
> http://mail.lon-capa.org/**mailman/listinfo/lon-capa-**admin<http://mail.lon-capa.org/mailman/listinfo/lon-capa-admin>
>
>
>
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